Cardenio

Cardenio v0.03 is a program made in the Jesus Vazquez Cardiovascular Proteomics Lab at Centro Nacional de Investigaciones Cardiovasculares, used to generate joined integration data and relations files from different experiments.

Usage:

cardenio.py [-h] -a ANALYSIS -p PLACE [-L LOGFILE] -t TAGFILE
                  [-d DATAFILE] [-r RELFILE] [-s SEPARATOR] [-v]

Arguments:

 -h, --help            show this help message and exit
 -a ANALYSIS, --analysis ANALYSIS
                       Use a prefix for the output files.
 -p PLACE, --place PLACE
                       To use a different common folder for the output files.
                       If this is not provided, the the folder used will be
                       the same as the FASTA file folder.
 -L LOGFILE, --logfile LOGFILE
                       To use a non-default name for the log file.
 -t TAGFILE, --tagfile TAGFILE
                       The file containing the tags used for the different
                       experiments to be joined.
 -d DATAFILE, --datafile DATAFILE
                       To use a non-default merged data file name.
 -r RELFILE, --relfile RELFILE
                       To use a non-default merged relations file name.
 -s SEPARATOR, --separator SEPARATOR
                       To use a non-default suffix separator (default is
                       "_").
 -v, --verbose         To write down extra information about operations
                       performed.